Diversity of arbuscular mycorrhizal fungi associated with acacia trees in southwestern Saudi Arabia.
Identifieur interne : 000190 ( Main/Exploration ); précédent : 000189; suivant : 000191Diversity of arbuscular mycorrhizal fungi associated with acacia trees in southwestern Saudi Arabia.
Auteurs : Mosbah Mahdhi [Arabie saoudite] ; Taieb Tounekti [Arabie saoudite] ; Emad Abada [Arabie saoudite] ; Zarraq Al-Faifi [Arabie saoudite] ; Habib Khemira [Arabie saoudite]Source :
- Journal of basic microbiology [ 1521-4028 ] ; 2020.
Descripteurs français
- KwdFr :
- MESH :
- génétique : ADN fongique, ADN ribosomique, Mycorhizes.
- microbiologie : Acacia, Racines de plante.
- Arabie saoudite, Climat désertique, Microbiologie du sol, Phylogenèse, Rhizosphère, Écosystème.
- Wicri :
- geographic : Arabie saoudite.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : DNA, Fungal, DNA, Ribosomal.
- geographic : Saudi Arabia.
- classification : Mycorrhizae.
- microbiology : Acacia, Plant Roots.
- Desert Climate, Ecosystem, Phylogeny, Rhizosphere, Soil Microbiology.
Abstract
Acacia species produce extensive, deep root systems with a capacity to develop mycorrhizal symbioses that facilitate plant nutrition via enhanced soil nutrient absorption. This study aimed to evaluate the mycorrhizal status and the diversity of arbuscular mycorrhizal fungi (AMF) associated with acacia trees in southwestern Saudi Arabia. The mycorrhizal status varied greatly between species. The highest values of AMF root colonization and spore density were observed in the roots and in the rhizospheric soil of Acacia negrii. DNA was extracted from plant roots and the AMF large subunit ribosomal DNA (LSU rDNA) was amplified by a nested polymerase chain reaction. A total of 274 LSU rDNA cloned fragments from roots of the three acacia trees were sequenced. Phylogenetic analysis revealed a high AMF diversity, especially in Acacia tortilis. On the basis of LSU rDNA sequences, AMF was grouped into five genera: Glomus, Claroideoglomus, Acaulospora, Gigaspora, and Scutellospora. The genus Glomus fungi were the dominant colonizers of all three acacia species, while the genus Scutellospora fungi were found only in A. tortilis roots. The high AMF-acacia diversity suggests that AMF plays an important role in the sustainability of acacia species in the arid environment.
DOI: 10.1002/jobm.201900471
PubMed: 31840835
Affiliations:
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xml:lang="fr"><term>Arabie saoudite</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Acacia species produce extensive, deep root systems with a capacity to develop mycorrhizal symbioses that facilitate plant nutrition via enhanced soil nutrient absorption. This study aimed to evaluate the mycorrhizal status and the diversity of arbuscular mycorrhizal fungi (AMF) associated with acacia trees in southwestern Saudi Arabia. The mycorrhizal status varied greatly between species. The highest values of AMF root colonization and spore density were observed in the roots and in the rhizospheric soil of Acacia negrii. DNA was extracted from plant roots and the AMF large subunit ribosomal DNA (LSU rDNA) was amplified by a nested polymerase chain reaction. A total of 274 LSU rDNA cloned fragments from roots of the three acacia trees were sequenced. Phylogenetic analysis revealed a high AMF diversity, especially in Acacia tortilis. On the basis of LSU rDNA sequences, AMF was grouped into five genera: Glomus, Claroideoglomus, Acaulospora, Gigaspora, and Scutellospora. The genus Glomus fungi were the dominant colonizers of all three acacia species, while the genus Scutellospora fungi were found only in A. tortilis roots. The high AMF-acacia diversity suggests that AMF plays an important role in the sustainability of acacia species in the arid environment.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">31840835</PMID><DateCompleted><Year>2020</Year><Month>10</Month><Day>08</Day></DateCompleted><DateRevised><Year>2020</Year><Month>10</Month><Day>08</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1521-4028</ISSN><JournalIssue CitedMedium="Internet"><Volume>60</Volume><Issue>4</Issue><PubDate><Year>2020</Year><Month>Apr</Month></PubDate></JournalIssue><Title>Journal of basic microbiology</Title><ISOAbbreviation>J Basic Microbiol</ISOAbbreviation></Journal><ArticleTitle>Diversity of arbuscular mycorrhizal fungi associated with acacia trees in southwestern Saudi Arabia.</ArticleTitle><Pagination><MedlinePgn>322-330</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1002/jobm.201900471</ELocationID><Abstract><AbstractText>Acacia species produce extensive, deep root systems with a capacity to develop mycorrhizal symbioses that facilitate plant nutrition via enhanced soil nutrient absorption. This study aimed to evaluate the mycorrhizal status and the diversity of arbuscular mycorrhizal fungi (AMF) associated with acacia trees in southwestern Saudi Arabia. The mycorrhizal status varied greatly between species. The highest values of AMF root colonization and spore density were observed in the roots and in the rhizospheric soil of Acacia negrii. DNA was extracted from plant roots and the AMF large subunit ribosomal DNA (LSU rDNA) was amplified by a nested polymerase chain reaction. A total of 274 LSU rDNA cloned fragments from roots of the three acacia trees were sequenced. Phylogenetic analysis revealed a high AMF diversity, especially in Acacia tortilis. On the basis of LSU rDNA sequences, AMF was grouped into five genera: Glomus, Claroideoglomus, Acaulospora, Gigaspora, and Scutellospora. The genus Glomus fungi were the dominant colonizers of all three acacia species, while the genus Scutellospora fungi were found only in A. tortilis roots. The high AMF-acacia diversity suggests that AMF plays an important role in the sustainability of acacia species in the arid environment.</AbstractText><CopyrightInformation>© 2019 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Mahdhi</LastName><ForeName>Mosbah</ForeName><Initials>M</Initials><Identifier Source="ORCID">http://orcid.org/0000-0003-3102-2141</Identifier><AffiliationInfo><Affiliation>Centre for Environmental Research and Studies, Jazan University, Jazan, Saudi Arabia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tounekti</LastName><ForeName>Taieb</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Centre for Environmental Research and Studies, Jazan University, Jazan, Saudi Arabia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Abada</LastName><ForeName>Emad</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Department of Biology, Faculty of Science, Jazan University, Jazan, Saudi Arabia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Al-Faifi</LastName><ForeName>Zarraq</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>Centre for Environmental Research and Studies, Jazan University, Jazan, Saudi Arabia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Biology, Faculty of Science, Jazan University, Jazan, Saudi Arabia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Khemira</LastName><ForeName>Habib</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Centre for Environmental Research and Studies, Jazan University, Jazan, Saudi Arabia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>12</Month><Day>16</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>J Basic Microbiol</MedlineTA><NlmUniqueID>8503885</NlmUniqueID><ISSNLinking>0233-111X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004271">DNA, Fungal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004275">DNA, Ribosomal</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000045" MajorTopicYN="N">Acacia</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004271" MajorTopicYN="N">DNA, Fungal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004275" MajorTopicYN="N">DNA, Ribosomal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D003889" MajorTopicYN="N">Desert Climate</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017753" MajorTopicYN="N">Ecosystem</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="Y">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D058441" MajorTopicYN="N">Rhizosphere</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012529" MajorTopicYN="N" Type="Geographic">Saudi Arabia</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="Y">Soil Microbiology</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Acacia</Keyword><Keyword MajorTopicYN="N">arbuscular mycorrhizal fungi</Keyword><Keyword MajorTopicYN="N">desertification</Keyword><Keyword MajorTopicYN="N">molecular diversity</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2019</Year><Month>08</Month><Day>22</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2019</Year><Month>11</Month><Day>17</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2019</Year><Month>12</Month><Day>02</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2019</Year><Month>12</Month><Day>17</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>10</Month><Day>9</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate 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Plant Soil. 2012;354:97-106.</Citation></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Arabie saoudite</li></country></list><tree><country name="Arabie saoudite"><noRegion><name sortKey="Mahdhi, Mosbah" sort="Mahdhi, Mosbah" uniqKey="Mahdhi M" first="Mosbah" last="Mahdhi">Mosbah Mahdhi</name></noRegion><name sortKey="Abada, Emad" sort="Abada, Emad" uniqKey="Abada E" first="Emad" last="Abada">Emad Abada</name><name sortKey="Al Faifi, Zarraq" sort="Al Faifi, Zarraq" uniqKey="Al Faifi Z" first="Zarraq" last="Al-Faifi">Zarraq Al-Faifi</name><name sortKey="Al Faifi, Zarraq" sort="Al Faifi, Zarraq" uniqKey="Al Faifi Z" first="Zarraq" last="Al-Faifi">Zarraq Al-Faifi</name><name sortKey="Khemira, Habib" sort="Khemira, Habib" uniqKey="Khemira H" first="Habib" last="Khemira">Habib Khemira</name><name sortKey="Tounekti, Taieb" sort="Tounekti, Taieb" uniqKey="Tounekti T" first="Taieb" last="Tounekti">Taieb Tounekti</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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